U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC118358502 secreted frizzled-related protein 1-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118358502, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC118358502
Gene description
secreted frizzled-related protein 1-like
See related
EnsemblRapid:ENSOKEG00005053073
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC118358502 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 25 NC_068445.1 (29191454..29218466, complement)

Chromosome 25 - NC_068445.1Genomic Context describing neighboring genes Neighboring gene transcriptional and immune response regulator-like Neighboring gene zinc finger matrin-type protein 4-like Neighboring gene lysyl oxidase homolog 2B Neighboring gene lysosomal membrane ascorbate-dependent ferrireductase CYB561A3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_068445.1 Chromosome 25 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
secreted frizzled-related protein 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068445.1 Reference Oket_V2 Primary Assembly

    Range
    29191454..29218466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035736401.2 → XP_035592294.1  secreted frizzled-related protein 1-like

    Related
    ENSOKEP00005098297.1, ENSOKET00005117284.1
    Conserved Domains (2) summary
    cd03580
    Location:178 → 302
    NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
    cl02447
    Location:46 → 169
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.