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LOC118343947 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like [ Juglans regia (English walnut) ]

Gene ID: 118343947, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118343947
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like
Locus tag
F2P56_002793
Gene type
protein coding
RefSeq status
MODEL
Organism
Juglans regia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Genomic context

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See LOC118343947 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Walnut 2.0 (GCF_001411555.2) 1 NC_049901.1 (41039522..41043116, complement)

Chromosome 1 - NC_049901.1Genomic Context describing neighboring genes Neighboring gene actin-related protein 6 Neighboring gene topless-related protein 4-like Neighboring gene topless-related protein 4-like Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like Neighboring gene auxin-responsive protein IAA29-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049901.1 Chromosome 1 Reference Walnut 2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Juglans regia Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Walnut 2.0 Primary Assembly

Genomic

  1. NC_049901.1 Reference Walnut 2.0 Primary Assembly

    Range
    41039522..41043116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035683303.1 → XP_035539196.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like

    UniProtKB/TrEMBL
    A0A2I4F4Y7, A0A833YAV1
    Conserved Domains (1) summary
    pfam04724
    Location:12 → 360
    Glyco_transf_17; Glycosyltransferase family 17
Nucleotide Protein
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