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brd7 bromodomain containing 7 [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118343363, updated on 20-Mar-2024

Summary

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Gene symbol
brd7
Gene description
bromodomain containing 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
Orthologs
human zebrafish all
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Genomic context

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See brd7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339663.1 (23541622..23551336)

NW_023339663.1Genomic Context describing neighboring genes Neighboring gene nucleotide-binding oligomerization domain containing 2 Neighboring gene NKD inhibitor of WNT signaling pathway 1 Neighboring gene adenylate cyclase 7 Neighboring gene terminal nucleotidyltransferase 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023339663 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis). Li C, et al. Anim Genet, 2014 Dec. PMID 25160849
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysine-acetylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339663.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    23541622..23551336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035682142.1 → XP_035538035.1  bromodomain-containing protein 7 isoform X1

    Conserved Domains (2) summary
    cd05513
    Location:118 → 215
    Bromo_brd7_like; Bromodomain, brd7_like subgroup. The BRD7 gene encodes a nuclear protein that has been shown to inhibit cell growth and the progression of the cell cycle by regulating cell-cycle genes at the transcriptional level. BRD7 has been identified as a gene ...
    pfam12024
    Location:273 → 457
    DUF3512; Domain of unknown function (DUF3512)

  2. XM_035682143.1 → XP_035538036.1  bromodomain-containing protein 7 isoform X2

    Conserved Domains (2) summary
    cd05513
    Location:118 → 215
    Bromo_brd7_like; Bromodomain, brd7_like subgroup. The BRD7 gene encodes a nuclear protein that has been shown to inhibit cell growth and the progression of the cell cycle by regulating cell-cycle genes at the transcriptional level. BRD7 has been identified as a gene ...
    pfam12024
    Location:273 → 452
    DUF3512; Domain of unknown function (DUF3512)
Nucleotide Protein
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