U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tpx2 TPX2 microtubule nucleation factor [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118324451, updated on 20-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
tpx2
Gene description
TPX2 microtubule nucleation factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tpx2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339707.1 (2417943..2427128)

NW_023339707.1Genomic Context describing neighboring genes Neighboring gene thiamin pyrophosphokinase 2 Neighboring gene ras homolog gene family, member Aa Neighboring gene procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a Neighboring gene KIAA2013 ortholog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_023339707 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis). Li C, et al. Anim Genet, 2014 Dec. PMID 25160849
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in activation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
targeting protein for Xklp2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339707.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    2417943..2427128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035656800.1 → XP_035512693.1  targeting protein for Xklp2 isoform X1

    Conserved Domains (3) summary
    pfam09041
    Location:12 → 41
    Aurora-A_bind; Aurora-A binding
    pfam06886
    Location:635 → 715
    TPX2; Targeting protein for Xklp2 (TPX2)
    pfam12214
    Location:342 → 465
    TPX2_importin; Cell cycle regulated microtubule associated protein

  2. XM_035656802.1 → XP_035512695.1  targeting protein for Xklp2 isoform X2

    Conserved Domains (3) summary
    pfam09041
    Location:12 → 41
    Aurora-A_bind; Aurora-A binding
    pfam06886
    Location:628 → 708
    TPX2; Targeting protein for Xklp2 (TPX2)
    pfam12214
    Location:342 → 465
    TPX2_importin; Cell cycle regulated microtubule associated protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.