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LOC118319188 C-terminal-binding protein 1 [ Scophthalmus maximus (turbot) ]

Gene ID: 118319188, updated on 6-Jun-2024

Summary

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Gene symbol
LOC118319188
Gene description
C-terminal-binding protein 1
See related
EnsemblRapid:ENSSMAG00025005980
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
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Genomic context

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See LOC118319188 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 9 NC_061523.1 (19434036..19461451, complement)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 13 NC_049700.1 (6342447..6369829)

Chromosome 9 - NC_061523.1Genomic Context describing neighboring genes Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene spondin 2b, extracellular matrix protein Neighboring gene heterogeneous nuclear ribonucleoprotein A0 Neighboring gene heterogeneous nuclear ribonucleoprotein A0-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061523.1 Reference ASM2237912v1 Primary Assembly

    Range
    19434036..19461451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035649348.2 → XP_035505241.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8D3AEC4
    Related
    ENSSMAP00025019324.1, ENSSMAT00025020178.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_035649349.2 → XP_035505242.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8D3AED3, A0A8D3C0H0
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_035649347.2 → XP_035505240.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8D3AED3, A0A8D3C0H0, A0A8D3DDN1
    Related
    ENSSMAP00025019322.1, ENSSMAT00025020176.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_035649351.2 → XP_035505244.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8D3AED3, A0A8D3C0H0
    Related
    ENSSMAP00025019291.1, ENSSMAT00025020145.1
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_035649352.2 → XP_035505245.1  C-terminal-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8D3AEF0
    Related
    ENSSMAP00025019320.1, ENSSMAT00025020174.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_035649353.2 → XP_035505246.2  C-terminal-binding protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8D3AEF0
Nucleotide Protein Strain
Heading Accession and Version

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