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hyal3 hyaluronidase 3 [ Scophthalmus maximus (turbot) ]

Gene ID: 118317532, updated on 20-Mar-2024

Summary

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Gene symbol
hyal3
Gene description
hyaluronidase 3
See related
EnsemblRapid:ENSSMAG00025022169
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
zebrafish all
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Genomic context

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See hyal3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 3 NC_061517.1 (16893295..16903529, complement)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 11 NC_049698.1 (9203907..9212664)

Chromosome 3 - NC_061517.1Genomic Context describing neighboring genes Neighboring gene interferon-related developmental regulator 2 Neighboring gene uncharacterized LOC118317537 Neighboring gene aminomethyltransferase Neighboring gene N-alpha-acetyltransferase 80 Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha A Neighboring gene uncharacterized LOC118317539 Neighboring gene monoglyceride lipase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061517.1 Reference ASM2237912v1 Primary Assembly

    Range
    16893295..16903529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047331358.1 → XP_047187314.1  hyaluronidase-3

  2. XM_035646315.2 → XP_035502208.2  hyaluronidase-3

    Related
    ENSSMAP00025069158.1, ENSSMAT00025074397.1

  3. XM_035646314.2 → XP_035502207.2  hyaluronidase-3

    Related
    ENSSMAP00025069161.1, ENSSMAT00025074400.1
Nucleotide Protein Strain
Heading Accession and Version

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