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LOC118317529 solute carrier family 26 member 6 [ Scophthalmus maximus (turbot) ]

Gene ID: 118317529, updated on 10-Oct-2024

Summary

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Gene symbol
LOC118317529
Gene description
solute carrier family 26 member 6
See related
EnsemblRapid:ENSSMAG00025022186
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Also known as
slc26a6
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Genomic context

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See LOC118317529 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 3 NC_061517.1 (16980654..17000050, complement)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 11 NC_049698.1 (9107839..9127198)

Chromosome 3 - NC_061517.1Genomic Context describing neighboring genes Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha A Neighboring gene uncharacterized LOC118317539 Neighboring gene monoglyceride lipase Neighboring gene solute carrier family 26 member 6 Neighboring gene uncharacterized LOC118317538

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables bicarbonate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxalate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables secondary active sulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 26 member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061517.1 Reference ASM2237912v1 Primary Assembly

    Range
    16980654..17000050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035646304.2 → XP_035502197.2  solute carrier family 26 member 6

    UniProtKB/TrEMBL
    A0A2U9C2X3
    Related
    ENSSMAP00025069614.1, ENSSMAT00025075210.1

  2. XM_035646305.2 → XP_035502198.2  solute carrier family 26 member 6

    UniProtKB/TrEMBL
    A0A2U9C2X3
    Related
    ENSSMAP00025069623.1, ENSSMAT00025075219.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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