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c4b complement C4B (Chido/Rodgers blood group) [ Scophthalmus maximus (turbot) ]

Gene ID: 118309790, updated on 20-Mar-2024

Summary

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Gene symbol
c4b
Gene description
complement C4B (Chido/Rodgers blood group)
See related
EnsemblRapid:ENSSMAG00025014067
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
zebrafish all
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Genomic context

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See c4b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
41
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 1 NC_061515.1 (10180339..10193751, complement)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 1 NC_049688.1 (21977575..21990961)

Chromosome 1 - NC_061515.1Genomic Context describing neighboring genes Neighboring gene steroid 21-hydroxylase Neighboring gene tenascin XBa Neighboring gene macrophage mannose receptor 1 Neighboring gene retinoid x receptor, beta b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in complement activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C4-B
Names
complement 4B (Chido blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061515.1 Reference ASM2237912v1 Primary Assembly

    Range
    10180339..10193751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035632295.2 → XP_035488188.2  complement C4-B

    Related
    ENSSMAP00025045857.1, ENSSMAT00025048099.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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