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LOC118309284 cytokine-inducible SH2-containing protein-like [ Scophthalmus maximus (turbot) ]

Gene ID: 118309284, updated on 23-Oct-2023

Summary

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Gene symbol
LOC118309284
Gene description
cytokine-inducible SH2-containing protein-like
See related
EnsemblRapid:ENSSMAG00025020644
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
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Genomic context

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See LOC118309284 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 6 NC_061520.1 (12980082..12982691)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 6 NC_049693.1 (12877692..12880300)

Chromosome 6 - NC_061520.1Genomic Context describing neighboring genes Neighboring gene mitochondrial RNA pseudouridine synthase rpusd4 Neighboring gene WD repeat-containing protein 82 Neighboring gene transforming protein RhoA Neighboring gene transmembrane protein 43 Neighboring gene uncharacterized LOC118309265

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine-inducible SH2-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061520.1 Reference ASM2237912v1 Primary Assembly

    Range
    12980082..12982691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035631215.2 → XP_035487108.1  cytokine-inducible SH2-containing protein-like

    UniProtKB/TrEMBL
    A0A2U9BFR2, A0A8D3DIT4
    Related
    ENSSMAP00025064833.1, ENSSMAT00025069465.1
    Conserved Domains (2) summary
    smart00969
    Location:171 → 204
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:43 → 129
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases