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pde9ac phosphodiesterase 9ac [ Scophthalmus maximus (turbot) ]

Gene ID: 118299849, updated on 10-Oct-2024

Summary

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Gene symbol
pde9ac
Gene description
phosphodiesterase 9ac
See related
EnsemblRapid:ENSSMAG00025002074
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Also known as
pde9al
Orthologs
zebrafish all
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Genomic context

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See pde9ac in Genome Data Viewer
Location:
chromosome: 11
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 11 NC_061525.1 (14263082..14272994)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 3 NC_049690.1 (14532323..14542167)

Chromosome 11 - NC_061525.1Genomic Context describing neighboring genes Neighboring gene sperm autoantigenic protein 17 Neighboring gene hepatic and glial cell adhesion molecule a Neighboring gene OAF homolog a (Drosophila) Neighboring gene TLC domain containing 5a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Names
phosphodiesterase 9A like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061525.1 Reference ASM2237912v1 Primary Assembly

    Range
    14263082..14272994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047335840.1 → XP_047191796.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

    UniProtKB/TrEMBL
    A0A2U9B4X8
    Related
    ENSSMAP00025006203.1, ENSSMAT00025006767.1

  2. XM_035623926.2 → XP_035479819.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X4

    UniProtKB/TrEMBL
    A0A2U9B4X8, A0A2U9B4Z0
    Conserved Domains (1) summary
    pfam00233
    Location:251 → 481
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_035623921.2 → XP_035479814.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

    UniProtKB/TrEMBL
    A0A2U9B4Z0
    Conserved Domains (1) summary
    pfam00233
    Location:293 → 523
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_035623922.2 → XP_035479815.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

    UniProtKB/TrEMBL
    A0A2U9B4Z0
    Conserved Domains (1) summary
    pfam00233
    Location:293 → 523
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  5. XM_035623923.2 → XP_035479816.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X3

    UniProtKB/TrEMBL
    A0A2U9B4Z0
    Related
    ENSSMAP00025006207.1, ENSSMAT00025006771.1
    Conserved Domains (1) summary
    pfam00233
    Location:293 → 523
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein Strain
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