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zbtb44 zinc finger and BTB domain containing 44 [ Scophthalmus maximus (turbot) ]

Gene ID: 118299238, updated on 10-Oct-2024

Summary

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Gene symbol
zbtb44
Gene description
zinc finger and BTB domain containing 44
See related
EnsemblRapid:ENSSMAG00025012137
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
human zebrafish all
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Genomic context

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See zbtb44 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 11 NC_061525.1 (3583818..3598448)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 3 NC_049690.1 (3908711..3924545)

Chromosome 11 - NC_061525.1Genomic Context describing neighboring genes Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 15 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 8-like Neighboring gene uncharacterized protein C11orf53 homolog Neighboring gene uncharacterized LOC118299596 Neighboring gene lnc RNA pou2af1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061525.1 Reference ASM2237912v1 Primary Assembly

    Range
    3583818..3598448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035622778.2 → XP_035478671.1  zinc finger and BTB domain-containing protein 44 isoform X3

    UniProtKB/TrEMBL
    A0A6A4SCI0, A0A8D3B0M5
    Conserved Domains (6) summary
    COG5048
    Location:434 → 498
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:348 → 498
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:450 → 470
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:538 → 560
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:46 → 164
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:462 → 487
    zf-H2C2_2; Zinc-finger double domain

  2. XM_035622776.2 → XP_035478669.2  zinc finger and BTB domain-containing protein 44 isoform X1

    Related
    ENSSMAP00025040169.1, ENSSMAT00025041788.1

  3. XM_035622779.2 → XP_035478672.2  zinc finger and BTB domain-containing protein 44 isoform X4

  4. XM_035622777.2 → XP_035478670.2  zinc finger and BTB domain-containing protein 44 isoform X2

  5. XM_035622780.2 → XP_035478673.1  zinc finger and BTB domain-containing protein 44 isoform X5

    Conserved Domains (5) summary
    COG5048
    Location:434 → 498
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:348 → 498
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:450 → 470
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:46 → 164
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:462 → 487
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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