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LOC118288867 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Scophthalmus maximus (turbot) ]

Gene ID: 118288867, updated on 23-Oct-2023

Summary

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Gene symbol
LOC118288867
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
See related
EnsemblRapid:ENSSMAG00025007636
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
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Genomic context

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See LOC118288867 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 17 NC_061531.1 (10670833..10684733)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 19 NC_049706.1 (10971195..10985093)

Chromosome 17 - NC_061531.1Genomic Context describing neighboring genes Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene uncharacterized LOC118288880 Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene fumarylacetoacetate hydrolase domain containing 1 Neighboring gene hydroxyacylglutathione hydrolase Neighboring gene nuclear prelamin A recognition factor-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061531.1 Reference ASM2237912v1 Primary Assembly

    Range
    10670833..10684733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035615434.2 → XP_035471327.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A2U9CQJ2, A0A6A4SQP5
    Related
    ENSSMAP00025024773.1, ENSSMAT00025025792.1
    Conserved Domains (1) summary
    pfam00685
    Location:134 → 370
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein Strain
Heading Accession and Version

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