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Aqp3 aquaporin 3 [ Mus musculus (house mouse) ]

Gene ID: 11828, updated on 2-Nov-2024

Summary

Official Symbol
Aqp3provided by MGI
Official Full Name
aquaporin 3provided by MGI
Primary source
MGI:MGI:1333777
See related
Ensembl:ENSMUSG00000028435 AllianceGenome:MGI:1333777
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AQP-2
Summary
Predicted to enable channel activity; identical protein binding activity; and urea transmembrane transporter activity. Involved in glycerol transmembrane transport and water transport. Acts upstream of or within several processes, including renal water absorption; response to ischemia; and urea transport. Located in basolateral plasma membrane and cell-cell junction. Is expressed in several structures, including alimentary system; capillary; early conceptus; genitourinary system; and sensory organ. Used to study nephrogenic diabetes insipidus. Orthologous to human AQP3 (aquaporin 3 (Gill blood group)). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in bladder adult (RPKM 172.0), stomach adult (RPKM 137.4) and 6 other tissues See more
Orthologs
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Genomic context

See Aqp3 in Genome Data Viewer
Location:
4 A5; 4 20.94 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (41092724..41098183, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (41092724..41098183, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene aquaporin 7 Neighboring gene predicted gene, 25637 Neighboring gene STARR-seq mESC enhancer starr_10018 Neighboring gene STARR-positive B cell enhancer ABC_E150 Neighboring gene STARR-positive B cell enhancer ABC_E6162 Neighboring gene nucleolar protein family 6 (RNA-associated) Neighboring gene ubiquitin-conjugating enzyme E2R 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables glycerol channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables glycerol channel activity ISO
Inferred from Sequence Orthology
more info
 
enables glycerol channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables polyol transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables polyol transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables urea transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables water channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables water channel activity ISO
Inferred from Sequence Orthology
more info
 
enables water channel activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables water channel activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within establishment of localization in cell IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glycerol transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in glycerol transmembrane transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in glycerol transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in odontogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in polyol transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of immune system process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within renal water absorption IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within renal water absorption IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within response to ischemia IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to retinoic acid IEA
Inferred from Electronic Annotation
more info
 
involved_in response to retinoic acid ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within urea transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in water transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in water transport IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within water transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in water transport ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within water transport TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
is_active_in basolateral plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cell-cell junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell-cell junction ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
aquaporin-3
Names
AQP-3
aquaglyceroporin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016689.2NP_057898.2  aquaporin-3

    See identical proteins and their annotated locations for NP_057898.2

    Status: VALIDATED

    Source sequence(s)
    AK145678
    Consensus CDS
    CCDS38714.1
    UniProtKB/Swiss-Prot
    Q3TU75, Q8R2N1, Q9JJN8, Q9WTJ3
    Related
    ENSMUSP00000055110.8, ENSMUST00000055327.8
    Conserved Domains (1) summary
    cd00333
    Location:23264
    MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    41092724..41098183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)