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DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 [ Cygnus atratus (black swan) ]

Gene ID: 118256924, updated on 20-Mar-2024

Summary

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Gene symbol
DNAJB6
Gene description
DnaJ heat shock protein family (Hsp40) member B6
See related
EnsemblRapid:ENSACYG00000016841
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See DNAJB6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 2 NC_066363.1 (9538981..9606610)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336674.1 (211804..279432)

Chromosome 2 - NC_066363.1Genomic Context describing neighboring genes Neighboring gene motor neuron and pancreas homeobox 1 Neighboring gene ubiquitin protein ligase E3C Neighboring gene uncharacterized LOC118256925 Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene non-SMC condensin II complex subunit G2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066363.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    9538981..9606610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035564341.2 → XP_035420234.1  dnaJ homolog subfamily B member 6 isoform X2

    Related
    ENSACYP00000027718.1
    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_035564333.2 → XP_035420226.1  dnaJ homolog subfamily B member 6 isoform X1

    Related
    ENSACYP00000027715.1
    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  3. XM_050708429.1 → XP_050564386.1  dnaJ homolog subfamily B member 6 isoform X3

  4. XM_035564334.2 → XP_035420227.1  dnaJ homolog subfamily B member 6 isoform X1

    Related
    ENSACYP00000027732.1
    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  5. XM_035564336.1 → XP_035420229.1  dnaJ homolog subfamily B member 6 isoform X1

    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  6. XM_035564346.2 → XP_035420239.1  dnaJ homolog subfamily B member 6 isoform X3

    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  7. XM_035564345.2 → XP_035420238.1  dnaJ homolog subfamily B member 6 isoform X3

    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  8. XM_035564335.1 → XP_035420228.1  dnaJ homolog subfamily B member 6 isoform X1

    Related
    ENSACYP00000027745.1, ENSACYT00000030090.1
    Conserved Domains (1) summary
    COG0484
    Location:2 → 106
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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