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HS3ST6 heparan sulfate-glucosamine 3-sulfotransferase 6 [ Cygnus atratus (black swan) ]

Gene ID: 118256422, updated on 20-Mar-2024

Summary

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Gene symbol
HS3ST6
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See HS3ST6 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 15 NC_066376.1 (1767457..1797592)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336667.1 (2234756..2264891, complement)

Chromosome 15 - NC_066376.1Genomic Context describing neighboring genes Neighboring gene testis-expressed protein 2-like Neighboring gene methionine sulfoxide reductase B1 Neighboring gene meiosis specific with OB-fold Neighboring gene fumarylacetoacetate hydrolase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066376.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    1767457..1797592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035563384.1 → XP_035419277.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    Conserved Domains (1) summary
    pfam00685
    Location:77 → 317
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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