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AKR1D1 aldo-keto reductase family 1 member D1 [ Cygnus atratus (black swan) ]

Gene ID: 118255483, updated on 2-May-2024

Summary

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Gene symbol
AKR1D1
Gene description
aldo-keto reductase family 1 member D1
See related
EnsemblRapid:ENSACYG00000000952
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See AKR1D1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 1 NC_066362.1 (60693236..60727738)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336588.1 (33070985..33105489)

Chromosome 1 - NC_066362.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 24 Neighboring gene uncharacterized LOC118255476 Neighboring gene uncharacterized LOC118255492 Neighboring gene protein mono-ADP-ribosyltransferase PARP12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Delta4-3-oxosteroid 5beta-reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aldose reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ketosteroid monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldo-keto reductase family 1 member D1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066362.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    60693236..60727738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035561699.2 → XP_035417592.1  aldo-keto reductase family 1 member D1

    Related
    ENSACYP00000001560.1
    Conserved Domains (1) summary
    cd19109
    Location:15 → 322
    AKR_AKR1D1-3; AKR1D family of aldo-keto reductase (AKR)
Nucleotide Protein
Heading Accession and Version

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