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LOC118253776 guanine nucleotide-binding protein G(q) subunit alpha [ Cygnus atratus (black swan) ]

Gene ID: 118253776, updated on 23-Nov-2023

Summary

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Gene symbol
LOC118253776
Gene description
guanine nucleotide-binding protein G(q) subunit alpha
See related
EnsemblRapid:ENSACYG00000007431
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
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Genomic context

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See LOC118253776 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) Z NC_066396.1 (40707131..40840404, complement)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336640.1 (785703..919192)

Chromosome Z - NC_066396.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 13 homolog A Neighboring gene guanine nucleotide-binding protein subunit alpha-14 Neighboring gene centrosomal protein 78 Neighboring gene phosphoserine aminotransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables G-protein beta/gamma-subunit complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipase C-activating dopamine receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heterotrimeric G-protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein G(q) subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066396.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    40707131..40840404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035558539.2 → XP_035414432.1  guanine nucleotide-binding protein G(q) subunit alpha

    Related
    ENSACYP00000012105.1
    Conserved Domains (1) summary
    cd00066
    Location:40 → 353
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)
Nucleotide Protein
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