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ANO5 anoctamin 5 [ Cygnus atratus (black swan) ]

Gene ID: 118249899, updated on 20-Mar-2024

Summary

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Gene symbol
ANO5
Gene description
anoctamin 5
See related
EnsemblRapid:ENSACYG00000003403
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See ANO5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 5 NC_066366.1 (10136393..10191359, complement)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336612.1 (2975591..3030561)

Chromosome 5 - NC_066366.1Genomic Context describing neighboring genes Neighboring gene FA complementation group F Neighboring gene solute carrier family 17 member 6 Neighboring gene neural EGFL like 1 Neighboring gene solute carrier family 6 member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066366.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    10136393..10191359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035550405.2 → XP_035406298.1  anoctamin-5 isoform X10

    Related
    ENSACYP00000005809.1
    Conserved Domains (2) summary
    pfam04547
    Location:291 → 868
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:71 → 288
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_035550408.2 → XP_035406301.1  anoctamin-5 isoform X12

    Related
    ENSACYP00000005785.1
    Conserved Domains (2) summary
    pfam04547
    Location:276 → 853
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:56 → 273
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  3. XM_050711115.1 → XP_050567072.1  anoctamin-5 isoform X14

  4. XM_035550402.2 → XP_035406295.1  anoctamin-5 isoform X7

    Conserved Domains (2) summary
    pfam04547
    Location:293 → 870
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:56 → 290
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  5. XM_035550404.2 → XP_035406297.1  anoctamin-5 isoform X9

    Conserved Domains (2) summary
    pfam04547
    Location:292 → 869
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:72 → 289
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  6. XM_035550399.2 → XP_035406292.1  anoctamin-5 isoform X4

    Conserved Domains (2) summary
    pfam04547
    Location:309 → 886
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:72 → 306
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  7. XM_035550403.2 → XP_035406296.1  anoctamin-5 isoform X8

    Related
    ENSACYP00000005721.1
    Conserved Domains (2) summary
    pfam04547
    Location:293 → 870
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:73 → 290
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  8. XM_035550398.2 → XP_035406291.1  anoctamin-5 isoform X3

    Conserved Domains (2) summary
    pfam04547
    Location:310 → 887
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:73 → 307
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  9. XM_050711114.1 → XP_050567071.1  anoctamin-5 isoform X13

  10. XM_035550401.2 → XP_035406294.1  anoctamin-5 isoform X6

    Conserved Domains (2) summary
    pfam04547
    Location:308 → 885
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:71 → 305
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  11. XM_035550409.2 → XP_035406302.1  anoctamin-5 isoform X15

    Conserved Domains (2) summary
    pfam04547
    Location:307 → 884
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:87 → 304
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  12. XM_035550397.2 → XP_035406290.1  anoctamin-5 isoform X2

    Conserved Domains (2) summary
    pfam04547
    Location:324 → 901
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:87 → 321
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  13. XM_035550400.2 → XP_035406293.1  anoctamin-5 isoform X5

    Conserved Domains (2) summary
    pfam04547
    Location:308 → 885
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:88 → 305
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  14. XM_035550395.2 → XP_035406288.1  anoctamin-5 isoform X1

    Related
    ENSACYP00000005765.1
    Conserved Domains (2) summary
    pfam04547
    Location:325 → 902
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:88 → 322
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  15. XM_035550406.2 → XP_035406299.1  anoctamin-5 isoform X11

    Conserved Domains (2) summary
    pfam04547
    Location:287 → 864
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:50 → 284
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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