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CTBP2 C-terminal binding protein 2 [ Cygnus atratus (black swan) ]

Gene ID: 118248510, updated on 20-Mar-2024

Summary

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Gene symbol
CTBP2
Gene description
C-terminal binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See CTBP2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 7 NC_066368.1 (3710374..3835020)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336607.1 (3830339..3870707)

Chromosome 7 - NC_066368.1Genomic Context describing neighboring genes Neighboring gene erythroid differentiation regulatory factor 1 Neighboring gene testis expressed 36 Neighboring gene zinc finger RANBP2-type containing 1 Neighboring gene abraxas 2, BRISC complex subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066368.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    3710374..3835020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050711861.1 → XP_050567818.1  C-terminal-binding protein 2 isoform X4

  2. XM_050711855.1 → XP_050567812.1  C-terminal-binding protein 2 isoform X3

  3. XM_050711856.1 → XP_050567813.1  C-terminal-binding protein 2 isoform X3

  4. XM_050711857.1 → XP_050567814.1  C-terminal-binding protein 2 isoform X3

  5. XM_050711853.1 → XP_050567810.1  C-terminal-binding protein 2 isoform X3

  6. XM_050711852.1 → XP_050567809.1  C-terminal-binding protein 2 isoform X3

  7. XM_050711854.1 → XP_050567811.1  C-terminal-binding protein 2 isoform X3

  8. XM_035547528.2 → XP_035403421.1  C-terminal-binding protein 2 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:118 → 569
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:569 → 887
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  9. XM_050711851.1 → XP_050567808.1  C-terminal-binding protein 2 isoform X2

  10. XM_050711858.1 → XP_050567815.1  C-terminal-binding protein 2 isoform X4

  11. XM_050711860.1 → XP_050567817.1  C-terminal-binding protein 2 isoform X4

  12. XM_050711859.1 → XP_050567816.1  C-terminal-binding protein 2 isoform X4

Nucleotide Protein
Heading Accession and Version

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