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CTBP1 C-terminal binding protein 1 [ Cygnus atratus (black swan) ]

Gene ID: 118248340, updated on 20-Mar-2024

Summary

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Gene symbol
CTBP1
Gene description
C-terminal binding protein 1
See related
EnsemblRapid:ENSACYG00000011388
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See CTBP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 4 NC_066365.1 (70512943..70747905)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336606.1 (6387878..6617996, complement)

Chromosome 4 - NC_066365.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118248327 Neighboring gene UV stimulated scaffold protein A Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC118248406 Neighboring gene spondin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066365.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    70512943..70747905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050710298.1 → XP_050566255.1  C-terminal-binding protein 1 isoform X1

  2. XM_050710296.1 → XP_050566253.1  C-terminal-binding protein 1 isoform X1

  3. XM_050710301.1 → XP_050566258.1  C-terminal-binding protein 1 isoform X6

  4. XM_050710302.1 → XP_050566259.1  C-terminal-binding protein 1 isoform X8

  5. XM_035547163.2 → XP_035403056.1  C-terminal-binding protein 1 isoform X2

    Related
    ENSACYP00000018602.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_050710297.1 → XP_050566254.1  C-terminal-binding protein 1 isoform X3

  7. XM_050710295.1 → XP_050566252.1  C-terminal-binding protein 1 isoform X1

  8. XM_050710303.1 → XP_050566260.1  C-terminal-binding protein 1 isoform X9

  9. XM_050710305.1 → XP_050566262.1  C-terminal-binding protein 1 isoform X12

  10. XM_050710304.1 → XP_050566261.1  C-terminal-binding protein 1 isoform X10

  11. XM_035547164.2 → XP_035403057.1  C-terminal-binding protein 1 isoform X4

    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  12. XM_035547165.2 → XP_035403058.1  C-terminal-binding protein 1 isoform X5

    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  13. XM_050710300.1 → XP_050566257.1  C-terminal-binding protein 1 isoform X7

  14. XM_035547171.2 → XP_035403064.1  C-terminal-binding protein 1 isoform X10

    Related
    ENSACYP00000018694.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  15. XM_035547166.2 → XP_035403059.1  C-terminal-binding protein 1 isoform X6

    Related
    ENSACYP00000018614.1
    Conserved Domains (1) summary
    cd05299
    Location:26 → 344
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  16. XM_035547168.2 → XP_035403061.1  C-terminal-binding protein 1 isoform X10

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  17. XM_050710299.1 → XP_050566256.1  C-terminal-binding protein 1 isoform X6

  18. XM_035547176.2 → XP_035403069.1  C-terminal-binding protein 1 isoform X11

    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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