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MLYCD malonyl-CoA decarboxylase [ Cygnus atratus (black swan) ]

Gene ID: 118246449, updated on 20-Mar-2024

Summary

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Gene symbol
MLYCD
Gene description
malonyl-CoA decarboxylase
See related
EnsemblRapid:ENSACYG00000002673
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See MLYCD in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 12 NC_066373.1 (3916249..3937620)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336599.1 (18002362..18023734, complement)

Chromosome 12 - NC_066373.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel modifier subfamily G member 4 Neighboring gene heat shock factor binding protein 1 Neighboring gene cadherin 13 Neighboring gene uncharacterized LOC118246438 Neighboring gene M-phase phosphoprotein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables malonyl-CoA decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malonyl-CoA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of fatty acid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malonyl-CoA decarboxylase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066373.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    3916249..3937620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035543554.2 → XP_035399447.1  malonyl-CoA decarboxylase, mitochondrial

    Related
    ENSACYP00000004518.1
    Conserved Domains (2) summary
    pfam05292
    Location:204 → 467
    MCD; Malonyl-CoA decarboxylase C-terminal domain
    pfam17408
    Location:106 → 201
    MCD_N; Malonyl-CoA decarboxylase N-terminal domain
Nucleotide Protein
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