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POGLUT1 protein O-glucosyltransferase 1 [ Cygnus atratus (black swan) ]

Gene ID: 118245015, updated on 20-Mar-2024

Summary

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Gene symbol
POGLUT1
Gene description
protein O-glucosyltransferase 1
See related
EnsemblRapid:ENSACYG00000013934
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See POGLUT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 1 NC_066362.1 (85711520..85727514)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336593.1 (13644666..13660669, complement)

Chromosome 1 - NC_066362.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 6, lysophosphatidic Neighboring gene BCL9 transcription coactivator Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene CD80 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066362.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    85711520..85727514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035540562.2 → XP_035396455.1  protein O-glucosyltransferase 1

    Related
    ENSACYP00000022820.1
    Conserved Domains (1) summary
    cl23835
    Location:51 → 388
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
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