U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC118237445 tight junction protein ZO-2-like [ Anguilla anguilla (European eel) ]

Gene ID: 118237445, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC118237445
Gene description
tight junction protein ZO-2-like
See related
EnsemblRapid:ENSAANG00010028491
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC118237445 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
30
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 10 NC_049210.1 (40995661..41083659, complement)

Chromosome 10 - NC_049210.1Genomic Context describing neighboring genes Neighboring gene amyloid beta (A4) precursor protein-binding, family A, member 1a Neighboring gene family with sequence similarity 189 member A2 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta b Neighboring gene frataxin Neighboring gene unc-45 myosin chaperone B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_049210.1 Chromosome 10 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049210.1 Reference fAngAng1.pri Primary Assembly

    Range
    40995661..41083659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035436162.1 → XP_035292053.1  tight junction protein ZO-2-like isoform X4

    Conserved Domains (4) summary
    smart00072
    Location:692 → 871
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1035 → 1180
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:597 → 662
    SH3; Src Homology 3 domain superfamily

  2. XM_035436156.1 → XP_035292047.1  tight junction protein ZO-2-like isoform X4

    Conserved Domains (4) summary
    smart00072
    Location:692 → 871
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1035 → 1180
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:597 → 662
    SH3; Src Homology 3 domain superfamily

  3. XM_035436158.1 → XP_035292049.1  tight junction protein ZO-2-like isoform X4

    Conserved Domains (4) summary
    smart00072
    Location:692 → 871
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1035 → 1180
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:597 → 662
    SH3; Src Homology 3 domain superfamily

  4. XM_035436154.1 → XP_035292045.1  tight junction protein ZO-2-like isoform X2

    Related
    ENSAANP00010075903.1, ENSAANT00010078835.1
    Conserved Domains (4) summary
    smart00072
    Location:712 → 891
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1055 → 1200
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:29 → 114
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:617 → 682
    SH3; Src Homology 3 domain superfamily

  5. XM_035436155.1 → XP_035292046.1  tight junction protein ZO-2-like isoform X3

    Related
    ENSAANP00010075906.1, ENSAANT00010078838.1
    Conserved Domains (4) summary
    smart00072
    Location:703 → 882
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1046 → 1191
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:20 → 105
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:608 → 673
    SH3; Src Homology 3 domain superfamily

  6. XM_035436161.1 → XP_035292052.1  tight junction protein ZO-2-like isoform X5

    Conserved Domains (4) summary
    smart00072
    Location:717 → 896
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1023 → 1168
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:34 → 119
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:622 → 687
    SH3; Src Homology 3 domain superfamily

  7. XM_035436153.1 → XP_035292044.1  tight junction protein ZO-2-like isoform X1

    Related
    ENSAANP00010075909.1, ENSAANT00010078841.1
    Conserved Domains (4) summary
    smart00072
    Location:717 → 896
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1060 → 1205
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:34 → 119
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:622 → 687
    SH3; Src Homology 3 domain superfamily

  8. XM_035436160.1 → XP_035292051.1  tight junction protein ZO-2-like isoform X4

    Related
    ENSAANP00010075918.1, ENSAANT00010078850.1
    Conserved Domains (4) summary
    smart00072
    Location:692 → 871
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1035 → 1180
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:597 → 662
    SH3; Src Homology 3 domain superfamily

  9. XM_035436159.1 → XP_035292050.1  tight junction protein ZO-2-like isoform X4

    Conserved Domains (4) summary
    smart00072
    Location:692 → 871
    GuKc; Guanylate kinase homologues
    PHA03378
    Location:1035 → 1180
    PHA03378; EBNA-3B; Provisional
    cd00992
    Location:9 → 94
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:597 → 662
    SH3; Src Homology 3 domain superfamily

  10. XM_035436163.1 → XP_035292054.1  tight junction protein ZO-2-like isoform X6

    Conserved Domains (3) summary
    smart00072
    Location:717 → 896
    GuKc; Guanylate kinase homologues
    cd00992
    Location:34 → 119
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl17036
    Location:622 → 687
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases