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LOC118237094 VIP36-like protein [ Anguilla anguilla (European eel) ]

Gene ID: 118237094, updated on 19-Jun-2024

Summary

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Gene symbol
LOC118237094
Gene description
VIP36-like protein
See related
EnsemblRapid:ENSAANG00010015994
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
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Genomic context

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See LOC118237094 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 10 NC_049210.1 (30409760..30440062, complement)

Chromosome 10 - NC_049210.1Genomic Context describing neighboring genes Neighboring gene paired box protein Pax-8-like Neighboring gene WW domain-binding protein 1-like Neighboring gene mediator of RNA polymerase II transcription subunit 13-like Neighboring gene uncharacterized LOC118237098 Neighboring gene T-box transcription factor TBX3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049210.1 Chromosome 10 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049210.1 Reference fAngAng1.pri Primary Assembly

    Range
    30409760..30440062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035435531.1 → XP_035291422.1  VIP36-like protein

    UniProtKB/TrEMBL
    A0A9D3M545
    Related
    ENSAANP00010039827.1, ENSAANT00010041470.1
    Conserved Domains (1) summary
    cl14058
    Location:55 → 300
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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