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LOC118227482 anoctamin-5-like [ Anguilla anguilla (European eel) ]

Gene ID: 118227482, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118227482
Gene description
anoctamin-5-like
See related
EnsemblRapid:ENSAANG00010011116
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
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Genomic context

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See LOC118227482 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
23
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 5 NC_049205.1 (28212337..28276187)

Chromosome 5 - NC_049205.1Genomic Context describing neighboring genes Neighboring gene plakophilin-3-like Neighboring gene anoctamin-9-like Neighboring gene uncharacterized LOC118227483 Neighboring gene vesicular glutamate transporter 2.1 Neighboring gene growth arrest-specific protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049205.1 Chromosome 5 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049205.1 Reference fAngAng1.pri Primary Assembly

    Range
    28212337..28276187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035417985.1 → XP_035273876.1  anoctamin-5-like isoform X1

    UniProtKB/TrEMBL
    A0A9D3MGP9
    Related
    ENSAANP00010026612.1, ENSAANT00010027775.1
    Conserved Domains (2) summary
    pfam04547
    Location:334 → 921
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:114 → 331
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_035417986.1 → XP_035273877.1  anoctamin-5-like isoform X2

    UniProtKB/TrEMBL
    A0A9D3MGP9
    Related
    ENSAANP00010026644.1, ENSAANT00010027806.1
    Conserved Domains (2) summary
    pfam04547
    Location:318 → 905
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:98 → 315
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  3. XM_035417987.1 → XP_035273878.1  anoctamin-5-like isoform X3

    UniProtKB/TrEMBL
    A0A9D3MGP9
    Related
    ENSAANP00010026737.1, ENSAANT00010027900.1
    Conserved Domains (2) summary
    pfam04547
    Location:246 → 833
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:26 → 243
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  4. XM_035417988.1 → XP_035273879.1  anoctamin-5-like isoform X4

    UniProtKB/TrEMBL
    A0A9D3MGP9
    Related
    ENSAANP00010026856.1, ENSAANT00010028022.1
    Conserved Domains (2) summary
    pfam04547
    Location:244 → 831
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:24 → 241
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
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