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LOC118221104 polypeptide N-acetylgalactosaminyltransferase 2 [ Anguilla anguilla (European eel) ]

Gene ID: 118221104, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118221104
Gene description
polypeptide N-acetylgalactosaminyltransferase 2
See related
EnsemblRapid:ENSAANG00010001663
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
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Genomic context

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See LOC118221104 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 2 NC_049202.1 (31428136..31534856)

Chromosome 2 - NC_049202.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 133 Neighboring gene uncharacterized LOC118217662 Neighboring gene TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor Neighboring gene piggyBac transposable element-derived protein 5-like Neighboring gene component of oligomeric golgi complex 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049202.1 Chromosome 2 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049202.1 Reference fAngAng1.pri Primary Assembly

    Range
    31428136..31534856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035405823.1 → XP_035261714.1  polypeptide N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A9D3MXV1
    Related
    ENSAANP00010003889.1, ENSAANT00010004092.1
    Conserved Domains (2) summary
    cd02510
    Location:128 → 423
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:435 → 552
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
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