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LOC118212649 secreted frizzled-related protein 1-like [ Anguilla anguilla (European eel) ]

Gene ID: 118212649, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118212649
Gene description
secreted frizzled-related protein 1-like
See related
EnsemblRapid:ENSAANG00010026377
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
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Genomic context

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See LOC118212649 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 14 NC_049214.1 (25448808..25455228, complement)

Chromosome 14 - NC_049214.1Genomic Context describing neighboring genes Neighboring gene transcriptional and immune response regulator-like Neighboring gene zinc finger matrin-type protein 4-like Neighboring gene golgin subfamily A member 7-like Neighboring gene lysyl oxidase homolog 2B-like Neighboring gene R3H domain and coiled-coil containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049214.1 Chromosome 14 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049214.1 Reference fAngAng1.pri Primary Assembly

    Range
    25448808..25455228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035390795.1 → XP_035246686.1  secreted frizzled-related protein 1-like

    UniProtKB/TrEMBL
    A0A9D3RP75
    Related
    ENSAANP00010068764.1, ENSAANT00010071543.1
    Conserved Domains (2) summary
    cd03580
    Location:169 → 295
    NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
    cl02447
    Location:42 → 164
    CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
Nucleotide Protein
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