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lamb2 laminin, beta 2 (laminin S) [ Anguilla anguilla (European eel) ]

Gene ID: 118208291, updated on 20-Mar-2024

Summary

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Gene symbol
lamb2
Gene description
laminin, beta 2 (laminin S)
See related
EnsemblRapid:ENSAANG00010025263
Gene type
protein coding
RefSeq status
MODEL
Organism
Anguilla anguilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Anguillidae; Anguilla
Orthologs
human zebrafish all
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Genomic context

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See lamb2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
35
Annotation release Status Assembly Chr Location
100 current fAngAng1.pri (GCF_013347855.1) 11 NC_049211.1 (15346449..15382358)

Chromosome 11 - NC_049211.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118207593 Neighboring gene laminin, beta 2-like Neighboring gene ubiquitin specific peptidase 19 Neighboring gene uncharacterized si:dkey-32e6.3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049211.1 Chromosome 11 Reference fAngAng1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in basement membrane assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of laminin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit beta-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anguilla anguilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAngAng1.pri Primary Assembly

Genomic

  1. NC_049211.1 Reference fAngAng1.pri Primary Assembly

    Range
    15346449..15382358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035382816.1 → XP_035238707.1  laminin subunit beta-2 isoform X1

    Conserved Domains (6) summary
    smart00180
    Location:765 → 810
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1191 → 1785
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:858 → 903
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:813 → 861
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:33 → 266
    Laminin_N; Laminin N-terminal (Domain VI)
    cd22299
    Location:1720 → 1791
    cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)

  2. XM_035382815.1 → XP_035238706.1  laminin subunit beta-2 isoform X1

    Related
    ENSAANP00010068316.1, ENSAANT00010071073.1
    Conserved Domains (6) summary
    smart00180
    Location:765 → 810
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1191 → 1785
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:858 → 903
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:813 → 861
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:33 → 266
    Laminin_N; Laminin N-terminal (Domain VI)
    cd22299
    Location:1720 → 1791
    cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)

  3. XM_035382817.1 → XP_035238708.1  laminin subunit beta-2 isoform X2

    Conserved Domains (6) summary
    smart00180
    Location:765 → 810
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    COG1196
    Location:1180 → 1774
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00055
    Location:858 → 903
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    pfam00053
    Location:813 → 861
    Laminin_EGF; Laminin EGF domain
    pfam00055
    Location:33 → 266
    Laminin_N; Laminin N-terminal (Domain VI)
    cd22299
    Location:1709 → 1780
    cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
Nucleotide Protein
Heading Accession and Version

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