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CHRNA3 cholinergic receptor nicotinic alpha 3 subunit [ Oxyura jamaicensis (ruddy duck) ]

Gene ID: 118172008, updated on 20-Mar-2024

Summary

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Gene symbol
CHRNA3
Gene description
cholinergic receptor nicotinic alpha 3 subunit
See related
EnsemblRapid:ENSOJMG00000001265
Gene type
protein coding
RefSeq status
MODEL
Organism
Oxyura jamaicensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Oxyura
Orthologs
human mouse all
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Genomic context

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See CHRNA3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
100 current BPBGC_Ojam_1.0 (GCF_011077185.1) 10 NC_048902.1 (7909993..7918734, complement)

Chromosome 10 - NC_048902.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118172411 Neighboring gene proteasome 20S subunit alpha 4 Neighboring gene cholinergic receptor nicotinic alpha 5 subunit Neighboring gene cholinergic receptor nicotinic beta 4 subunit Neighboring gene uncharacterized LOC118172042

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048902.1 Chromosome 10 Reference BPBGC_Ojam_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal acetylcholine receptor subunit alpha-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oxyura jamaicensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BPBGC_Ojam_1.0

Genomic

  1. NC_048902.1 Reference BPBGC_Ojam_1.0

    Range
    7909993..7918734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035335606.1 → XP_035191497.1  neuronal acetylcholine receptor subunit alpha-3

    Conserved Domains (2) summary
    TIGR00860
    Location:23 → 487
    LIC; Cation transporter family protein
    cd19016
    Location:26 → 232
    LGIC_ECD_nAChR_A3; extracellular domain of nicotinic acetylcholine receptor subunit alpha 3 (CHRNA3)

  2. XM_035335604.1 → XP_035191495.1  neuronal acetylcholine receptor subunit alpha-3

    Related
    ENSOJMP00000001922.1, ENSOJMT00000001941.1
    Conserved Domains (2) summary
    TIGR00860
    Location:23 → 487
    LIC; Cation transporter family protein
    cd19016
    Location:26 → 232
    LGIC_ECD_nAChR_A3; extracellular domain of nicotinic acetylcholine receptor subunit alpha 3 (CHRNA3)
Nucleotide Protein
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