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CMAS cytidine monophosphate N-acetylneuraminic acid synthetase [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 118144192, updated on 20-Mar-2024

Summary

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Gene symbol
CMAS
Gene description
cytidine monophosphate N-acetylneuraminic acid synthetase
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See CMAS in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (45654021..45672869, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (46797794..46816699, complement)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene C2 calcium dependent domain containing 5 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC118144193 Neighboring gene ATP binding cassette subfamily C member 9 Neighboring gene uncharacterized LOC128928546 Neighboring gene potassium inwardly rectifying channel subfamily J member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acylneuraminate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acylneuraminate cytidylyltransferase
Names
N-acylneuraminate cytidylyltransferase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    45654021..45672869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035256103.2 → XP_035111994.1  N-acylneuraminate cytidylyltransferase

    UniProtKB/TrEMBL
    U3EIZ5
    Conserved Domains (2) summary
    cd02513
    Location:44 → 259
    CMP-NeuAc_Synthase; CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety
    cd01630
    Location:275 → 419
    HAD_KDO-like; haloacid dehalogenase-like (HAD) hydrolase, similar to Escherichia coli 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase KdsC, and rainbow trout N-acylneuraminate cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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