U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

st8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118125351, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
st8sia3
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
Locus tag
HST_G00178560
See related
EnsemblRapid:ENSHSTG00010013576
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See st8sia3 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
5
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 18 NC_061500.1 (1646371..1656077)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 18 NC_048944.1 (1619838..1629593)

Chromosome 18 - NC_061500.1Genomic Context describing neighboring genes Neighboring gene WD repeat-containing protein 7 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit C Neighboring gene one cut homeobox 2 Neighboring gene ferrochelatase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061500.1 Reference HSTE1.2 Primary Assembly

    Range
    1646371..1656077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035183804.2 → XP_035039695.1  sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase isoform X1

    Related
    ENSHSTP00010034551.1, ENSHSTT00010036983.1
    Conserved Domains (1) summary
    pfam00777
    Location:117 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_035183805.2 → XP_035039696.1  sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase isoform X2

    Related
    ENSHSTP00010034546.1, ENSHSTT00010036978.1
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.