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lipea lipase, hormone-sensitive a [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118125101, updated on 18-Sep-2024

Summary

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Gene symbol
lipea
Gene description
lipase, hormone-sensitive a
Locus tag
HST_G00170910
See related
EnsemblRapid:ENSHSTG00010015092
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See lipea in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 17 NC_061499.1 (4345042..4352251)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 17 NC_048943.1 (3698234..3705524)

Chromosome 17 - NC_061499.1Genomic Context describing neighboring genes Neighboring gene oleoyl-ACP hydrolase Neighboring gene solute carrier family 9 member A3, tandem duplicate 1 Neighboring gene probable ATP-dependent RNA helicase ddx6 Neighboring gene translocase of outer mitochondrial membrane 40 homolog, like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sterol ester esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipase, hormone-sensitive a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061499.1 Reference HSTE1.2 Primary Assembly

    Range
    4345042..4352251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035183472.2 → XP_035039363.1  lipase, hormone-sensitive a isoform X1

    Conserved Domains (2) summary
    pfam06350
    Location:32 → 343
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    pfam07859
    Location:376 → 686
    Abhydrolase_3; alpha/beta hydrolase fold

  2. XM_035183474.2 → XP_035039365.1  lipase, hormone-sensitive a isoform X2

    Related
    ENSHSTP00010039200.1, ENSHSTT00010041721.1
    Conserved Domains (2) summary
    pfam06350
    Location:14 → 325
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    pfam07859
    Location:358 → 668
    Abhydrolase_3; alpha/beta hydrolase fold

  3. XM_035183473.2 → XP_035039364.1  lipase, hormone-sensitive a isoform X1

    Related
    ENSHSTP00010039198.1, ENSHSTT00010041719.1
    Conserved Domains (2) summary
    pfam06350
    Location:32 → 343
    HSL_N; Hormone-sensitive lipase (HSL) N-terminus
    pfam07859
    Location:376 → 686
    Abhydrolase_3; alpha/beta hydrolase fold
Nucleotide Protein
Heading Accession and Version

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