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tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118124569, updated on 8-May-2024

Summary

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Gene symbol
tab1
Gene description
TGF-beta activated kinase 1/MAP3K7 binding protein 1
Locus tag
HST_G00019400
See related
EnsemblRapid:ENSHSTG00010005508
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See tab1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 2 NC_061484.1 (26503728..26516321, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 2 NC_048928.1 (26155751..26169616, complement)

Chromosome 2 - NC_061484.1Genomic Context describing neighboring genes Neighboring gene C1q and TNF related 6b Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase b Neighboring gene synaptogyrin-1 Neighboring gene intraflagellar transport 27 homolog (Chlamydomonas)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061484.1 Reference HSTE1.2 Primary Assembly

    Range
    26503728..26516321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035182558.2 → XP_035038449.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    Related
    ENSHSTP00010014258.1, ENSHSTT00010015115.1
    Conserved Domains (1) summary
    cd00143
    Location:41 → 349
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

  2. XM_035182549.2 → XP_035038440.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    Related
    ENSHSTP00010014408.1, ENSHSTT00010015319.1
    Conserved Domains (1) summary
    cd00143
    Location:41 → 349
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

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