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prkar1b protein kinase, cAMP-dependent, regulatory, type I, beta [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118123906, updated on 8-May-2024

Summary

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Gene symbol
prkar1b
Gene description
protein kinase, cAMP-dependent, regulatory, type I, beta
Locus tag
HST_G00161480
See related
EnsemblRapid:ENSHSTG00010016750
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See prkar1b in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 16 NC_061498.1 (8942258..9002860, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 16 NC_048942.1 (8620847..8681590, complement)

Chromosome 16 - NC_061498.1Genomic Context describing neighboring genes Neighboring gene nuclear GTPase SLIP-GC Neighboring gene nuclear GTPase SLIP-GC-like Neighboring gene platelet-derived growth factor alpha polypeptide b Neighboring gene dynein axonemal assembly factor 5 Neighboring gene uncharacterized LOC118123080 Neighboring gene glycerophosphodiester phosphodiesterase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cAMP-dependent protein kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cAMP-dependent protein kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cAMP-dependent protein kinase type I-beta regulatory subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061498.1 Reference HSTE1.2 Primary Assembly

    Range
    8942258..9002860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035181587.2 → XP_035037478.1  cAMP-dependent protein kinase type I-beta regulatory subunit isoform X4

    Related
    ENSHSTP00010044460.1, ENSHSTT00010047094.1
    Conserved Domains (1) summary
    cd00038
    Location:72 → 181
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_035181584.2 → XP_035037475.1  cAMP-dependent protein kinase type I-beta regulatory subunit isoform X1

    Related
    ENSHSTP00010044524.1, ENSHSTT00010047176.1
    Conserved Domains (2) summary
    cd12102
    Location:10 → 63
    DD_RIbeta_PKA; Dimerization/Docking domain of the Type I beta Regulatory subunit of cAMP-dependent protein kinase
    cd00038
    Location:136 → 245
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  3. XM_035181585.2 → XP_035037476.1  cAMP-dependent protein kinase type I-beta regulatory subunit isoform X2

    Related
    ENSHSTP00010044498.1, ENSHSTT00010047150.1
    Conserved Domains (1) summary
    cd00038
    Location:102 → 211
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  4. XM_035181586.2 → XP_035037477.1  cAMP-dependent protein kinase type I-beta regulatory subunit isoform X3

    Conserved Domains (1) summary
    cd00038
    Location:79 → 188
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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