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socs3a suppressor of cytokine signaling 3a [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118123896, updated on 8-May-2024

Summary

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Gene symbol
socs3a
Gene description
suppressor of cytokine signaling 3a
Locus tag
HST_G00161980
See related
EnsemblRapid:ENSHSTG00010022292
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See socs3a in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 16 NC_061498.1 (10099513..10102106)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 16 NC_048942.1 (9780936..9783538)

Chromosome 16 - NC_061498.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 36 Neighboring gene cytohesin 1a Neighboring gene transmembrane protein 235 Neighboring gene fascin actin-bundling protein 2a, retinal

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
suppressor of cytokine signaling 3a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061498.1 Reference HSTE1.2 Primary Assembly

    Range
    10099513..10102106
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035181554.2 → XP_035037445.1  suppressor of cytokine signaling 3a

    Related
    ENSHSTP00010059054.1, ENSHSTT00010062892.1
    Conserved Domains (2) summary
    cd10384
    Location:39 → 137
    SH2_SOCS3; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins
    cl02533
    Location:165 → 205
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
Nucleotide Protein
Heading Accession and Version

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