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pofut2 protein O-fucosyltransferase 2 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118119775, updated on 8-May-2024

Summary

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Gene symbol
pofut2
Gene description
protein O-fucosyltransferase 2
Locus tag
HST_G00134060
See related
EnsemblRapid:ENSHSTG00010004076
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See pofut2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 13 NC_061495.1 (10438565..10445018, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 13 NC_048939.1 (10273762..10280194, complement)

Chromosome 13 - NC_061495.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124854630 Neighboring gene uncharacterized LOC124854631 Neighboring gene tubulin alpha chain Neighboring gene tubulin alpha chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061495.1 Reference HSTE1.2 Primary Assembly

    Range
    10438565..10445018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035174047.2 → XP_035029938.1  GDP-fucose protein O-fucosyltransferase 2

    Related
    ENSHSTP00010011135.1, ENSHSTT00010011427.1
    Conserved Domains (1) summary
    cd11298
    Location:61 → 431
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein
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