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b3gat2 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118119394, updated on 8-May-2024

Summary

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Gene symbol
b3gat2
Gene description
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
Locus tag
HST_G00123580
See related
EnsemblRapid:ENSHSTG00010018472
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See b3gat2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 12 NC_061494.1 (3785298..3835228)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 12 NC_048938.1 (3633693..3682148)

Chromosome 12 - NC_061494.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118119146 Neighboring gene opioid growth factor receptor-like 1 Neighboring gene small ArfGAP 1 Neighboring gene solute carrier family 1 member 4 Neighboring gene SERTA domain containing 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061494.1 Reference HSTE1.2 Primary Assembly

    Range
    3785298..3835228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035173339.2 → XP_035029230.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

    Related
    ENSHSTP00010048866.1, ENSHSTT00010051878.1
    Conserved Domains (1) summary
    cd00218
    Location:63 → 286
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

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