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flot1b flotillin 1b [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118113210, updated on 8-May-2024

Summary

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Gene symbol
flot1b
Gene description
flotillin 1b
Locus tag
HST_G00085980
See related
EnsemblRapid:ENSHSTG00010018517
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See flot1b in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 8 NC_061490.1 (18357459..18378341, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 8 NC_048934.1 (18169137..18190173, complement)

Chromosome 8 - NC_061490.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 384 b Neighboring gene guanine nucleotide binding protein-like 1 Neighboring gene discoidin domain receptor tyrosine kinase 1 Neighboring gene tubulin, beta 5 Neighboring gene mediator of DNA damage checkpoint 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell-cell adhesion mediated by cadherin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein kinase C signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of receptor internalization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
flotillin-1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061490.1 Reference HSTE1.2 Primary Assembly

    Range
    18357459..18378341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035162704.2 → XP_035018595.1  flotillin-1b isoform X2

    Related
    ENSHSTP00010049163.1, ENSHSTT00010052175.1
    Conserved Domains (2) summary
    COG2268
    Location:4 → 418
    YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
    cd03399
    Location:30 → 175
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  2. XM_035162703.2 → XP_035018594.1  flotillin-1b isoform X1

    Related
    ENSHSTP00010049171.1, ENSHSTT00010052183.1
    Conserved Domains (2) summary
    COG2268
    Location:4 → 422
    YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
    cd03399
    Location:30 → 175
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
Nucleotide Protein
Heading Accession and Version

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