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LOC118112301 protein phosphatase 1 regulatory subunit 3E [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118112301, updated on 8-May-2024

Summary

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Gene symbol
LOC118112301
Gene description
protein phosphatase 1 regulatory subunit 3E
Locus tag
HST_G00005780
See related
EnsemblRapid:ENSHSTG00010023644
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See LOC118112301 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 1 NC_061483.1 (16479701..16484348, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 1 NC_048927.1 (16069692..16074335, complement)

Chromosome 1 - NC_061483.1Genomic Context describing neighboring genes Neighboring gene GINS complex subunit 2 Neighboring gene Gse1 coiled-coil protein b Neighboring gene uncharacterized LOC118105111 Neighboring gene ATM interactor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of protein phosphatase type 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 3E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061483.1 Reference HSTE1.2 Primary Assembly

    Range
    16479701..16484348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035161495.2 → XP_035017386.1  protein phosphatase 1 regulatory subunit 3E

    Related
    ENSHSTP00010062511.1, ENSHSTT00010066663.1
    Conserved Domains (2) summary
    pfam03370
    Location:182 → 287
    CBM_21; Carbohydrate/starch-binding module (family 21)
    cd22255
    Location:37 → 132
    PPP1R3A_PBD; PP1C binding domain found in protein phosphatase 1 regulatory subunit 3A (PPP1R3A) and similar proteins
Nucleotide Protein
Heading Accession and Version

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