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zgc:101663 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118110945, updated on 8-May-2024

Summary

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Gene symbol
zgc:101663
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
See related
EnsemblRapid:ENSHSTG00010016214
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See zgc:101663 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 6 NC_061488.1 (25140941..25151452)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 6 NC_048932.1 (25111692..25122184)

Chromosome 6 - NC_061488.1Genomic Context describing neighboring genes Neighboring gene selenophosphate synthetase 3 Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene cilia and flagella associated protein 126 Neighboring gene cyclin Q

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061488.1 Reference HSTE1.2 Primary Assembly

    Range
    25140941..25151452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035159126.2 → XP_035015017.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Conserved Domains (1) summary
    cl04660
    Location:69 → 315
    PGAP4-like; Post-GPI attachment to proteins factor 4 and similar proteins

  2. XM_035159127.2 → XP_035015018.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    Related
    ENSHSTP00010042736.1, ENSHSTT00010045284.1
    Conserved Domains (1) summary
    cl04660
    Location:69 → 315
    PGAP4-like; Post-GPI attachment to proteins factor 4 and similar proteins
Nucleotide Protein
Heading Accession and Version

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