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b3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118109223, updated on 8-May-2024

Summary

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Gene symbol
b3gnt9
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
Locus tag
HST_G00053550
See related
EnsemblRapid:ENSHSTG00010004954
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See b3gnt9 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 5 NC_061487.1 (24653325..24658969, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 5 NC_048931.1 (24192770..24198415, complement)

Chromosome 5 - NC_061487.1Genomic Context describing neighboring genes Neighboring gene core-binding factor subunit beta Neighboring gene phagosome assembly factor 1 Neighboring gene Bardet-Biedl syndrome 2 Neighboring gene uncharacterized LOC118110016 Neighboring gene transfer RNA proline (anticodon AGG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061487.1 Reference HSTE1.2 Primary Assembly

    Range
    24653325..24658969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035156153.2 → XP_035012044.1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9

    Related
    ENSHSTP00010013035.1, ENSHSTT00010013486.1
    Conserved Domains (2) summary
    PRK10905
    Location:70 → 142
    PRK10905; cell division protein DamX; Validated
    cl21608
    Location:195 → 386
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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