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zbtb44 zinc finger and BTB domain containing 44 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118106601, updated on 8-May-2024

Summary

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Gene symbol
zbtb44
Gene description
zinc finger and BTB domain containing 44
Locus tag
HST_G00042920
See related
EnsemblRapid:ENSHSTG00010001130
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See zbtb44 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 4 NC_061486.1 (20850993..20865567)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 4 NC_048930.1 (20579139..20593610)

Chromosome 4 - NC_061486.1Genomic Context describing neighboring genes Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 15 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 8 Neighboring gene uncharacterized protein C11orf53 homolog Neighboring gene lnc RNA pou2af1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061486.1 Reference HSTE1.2 Primary Assembly

    Range
    20850993..20865567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035155284.2 → XP_035011175.1  zinc finger and BTB domain-containing protein 44 isoform X2

    Conserved Domains (7) summary
    PLN03209
    Location:168 → 408
    PLN03209; translocon at the inner envelope of chloroplast subunit 62; Provisional
    COG5048
    Location:398 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:312 → 462
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:414 → 434
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:502 → 524
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:426 → 451
    zf-H2C2_2; Zinc-finger double domain

  2. XM_035155285.2 → XP_035011176.1  zinc finger and BTB domain-containing protein 44 isoform X3

    Related
    ENSHSTP00010002601.1, ENSHSTT00010002811.1
    Conserved Domains (6) summary
    PLN03209
    Location:202 → 442
    PLN03209; translocon at the inner envelope of chloroplast subunit 62; Provisional
    COG5048
    Location:432 → 496
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:346 → 496
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:448 → 468
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:46 → 164
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:460 → 485
    zf-H2C2_2; Zinc-finger double domain

  3. XM_035155283.2 → XP_035011174.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Related
    ENSHSTP00010002602.1, ENSHSTT00010002812.1
    Conserved Domains (7) summary
    PLN03209
    Location:202 → 442
    PLN03209; translocon at the inner envelope of chloroplast subunit 62; Provisional
    COG5048
    Location:432 → 496
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:346 → 496
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:448 → 468
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:536 → 558
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:46 → 164
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:460 → 485
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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