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pde9ac phosphodiesterase 9ac [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118106271, updated on 8-May-2024

Summary

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Gene symbol
pde9ac
Gene description
phosphodiesterase 9ac
Locus tag
HST_G00038770
See related
EnsemblRapid:ENSHSTG00010011646
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Also known as
pde9al
Orthologs
zebrafish all
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Genomic context

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See pde9ac in Genome Data Viewer
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 4 NC_061486.1 (12418056..12428947)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 4 NC_048930.1 (12269956..12281564)

Chromosome 4 - NC_061486.1Genomic Context describing neighboring genes Neighboring gene sperm autoantigenic protein 17 Neighboring gene hepatic and glial cell adhesion molecule a Neighboring gene OAF homolog a (Drosophila) Neighboring gene TLC domain containing 5a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Names
phosphodiesterase 9A like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061486.1 Reference HSTE1.2 Primary Assembly

    Range
    12418056..12428947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035154679.2 → XP_035010570.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Related
    ENSHSTP00010028761.1, ENSHSTT00010031035.1
    Conserved Domains (1) summary
    pfam00233
    Location:251 → 481
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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