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b3gat1a beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118106208, updated on 8-May-2024

Summary

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Gene symbol
b3gat1a
Gene description
beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a
Locus tag
HST_G00043470
See related
EnsemblRapid:ENSHSTG00010011672
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See b3gat1a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 4 NC_061486.1 (22833574..22915767, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 4 NC_048930.1 (22463798..22547701, complement)

Chromosome 4 - NC_061486.1Genomic Context describing neighboring genes Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene galactosidase beta 1 like 2 Neighboring gene sialic acid acetylesterase Neighboring gene transforming growth factor beta regulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061486.1 Reference HSTE1.2 Primary Assembly

    Range
    22833574..22915767 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035154575.2 → XP_035010466.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam03360
    Location:153 → 363
    Glyco_transf_43; Glycosyltransferase family 43

  2. XM_035154577.2 → XP_035010468.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam03360
    Location:153 → 363
    Glyco_transf_43; Glycosyltransferase family 43

  3. XM_035154580.2 → XP_035010471.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam03360
    Location:130 → 340
    Glyco_transf_43; Glycosyltransferase family 43

  4. XM_035154574.2 → XP_035010465.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    Related
    ENSHSTP00010028767.1, ENSHSTT00010031041.1
    Conserved Domains (1) summary
    pfam03360
    Location:153 → 363
    Glyco_transf_43; Glycosyltransferase family 43

  5. XM_035154581.2 → XP_035010472.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X3

    Conserved Domains (1) summary
    pfam03360
    Location:117 → 327
    Glyco_transf_43; Glycosyltransferase family 43

  6. XM_035154579.2 → XP_035010470.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam03360
    Location:130 → 340
    Glyco_transf_43; Glycosyltransferase family 43

  7. XM_035154582.2 → XP_035010473.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X4

    Related
    ENSHSTP00010028776.1, ENSHSTT00010031050.1
    Conserved Domains (1) summary
    pfam03360
    Location:106 → 316
    Glyco_transf_43; Glycosyltransferase family 43

  8. XM_035154576.2 → XP_035010467.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    pfam03360
    Location:153 → 363
    Glyco_transf_43; Glycosyltransferase family 43
Nucleotide Protein
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