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inppl1a inositol polyphosphate phosphatase-like 1a [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118105914, updated on 8-May-2024

Summary

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Gene symbol
inppl1a
Gene description
inositol polyphosphate phosphatase-like 1a
Locus tag
HST_G00039840
See related
EnsemblRapid:ENSHSTG00010003774
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See inppl1a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
28
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 4 NC_061486.1 (16314105..16341157, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 4 NC_048930.1 (16174503..16201754, complement)

Chromosome 4 - NC_061486.1Genomic Context describing neighboring genes Neighboring gene ClpB family mitochondrial disaggregase Neighboring gene paired like homeobox 2A Neighboring gene anaphase promoting complex subunit 15 Neighboring gene folate receptor Neighboring gene transmembrane O-methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061486.1 Reference HSTE1.2 Primary Assembly

    Range
    16314105..16341157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035153955.2 → XP_035009846.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2A isoform X2

    Related
    ENSHSTP00010010794.1, ENSHSTT00010011082.1
    Conserved Domains (3) summary
    cl00490
    Location:413 → 716
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    cl15255
    Location:18 → 120
    SH2; Src homology 2 (SH2) domain
    cl15755
    Location:1206 → 1261
    SAM_superfamily; SAM (Sterile alpha motif )

  2. XM_035153954.2 → XP_035009845.1  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2A isoform X1

    Conserved Domains (3) summary
    cl00490
    Location:413 → 716
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    cl15255
    Location:18 → 120
    SH2; Src homology 2 (SH2) domain
    cl15755
    Location:1207 → 1262
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein
Heading Accession and Version

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