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LOC118105780 alpha-(1,3)-fucosyltransferase 4-like [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118105780, updated on 23-Oct-2023

Summary

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Gene symbol
LOC118105780
Gene description
alpha-(1,3)-fucosyltransferase 4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC118105780 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 4 NC_061486.1 (10560271..10562501)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 4 NC_048930.1 (10399804..10402034)

Chromosome 4 - NC_061486.1Genomic Context describing neighboring genes Neighboring gene SH2B adapter protein 2 Neighboring gene cut-like homeobox 1b Neighboring gene collagen alpha-1(XXVI) chain Neighboring gene SRP receptor subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061486.1 Reference HSTE1.2 Primary Assembly

    Range
    10560271..10562501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035153612.1 → XP_035009503.1  alpha-(1,3)-fucosyltransferase 4-like

    Conserved Domains (2) summary
    pfam00852
    Location:234 → 407
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:96 → 204
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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