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flot1a flotillin 1a [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118103784, updated on 8-May-2024

Summary

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Gene symbol
flot1a
Gene description
flotillin 1a
Locus tag
HST_G00231380
See related
EnsemblRapid:ENSHSTG00010009242
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
zebrafish all
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Genomic context

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See flot1a in Genome Data Viewer
Location:
chromosome: 17
Exon count:
13
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 17 NC_061499.1 (1093460..1100906)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) Unplaced Scaffold NW_023312371.1 (36015..43523)

Chromosome 17 - NC_061499.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118103788 Neighboring gene tubulin beta chain Neighboring gene zinc finger protein 384 a Neighboring gene kinesin family member C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell-cell adhesion mediated by cadherin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein kinase C signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of receptor internalization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
flotillin-1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061499.1 Reference HSTE1.2 Primary Assembly

    Range
    1093460..1100906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035150888.2 → XP_035006779.1  flotillin-1a isoform X2

    Related
    ENSHSTP00010020972.1, ENSHSTT00010023114.1
    Conserved Domains (2) summary
    COG2268
    Location:4 → 414
    YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
    cd03399
    Location:30 → 175
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  2. XM_035150887.2 → XP_035006778.1  flotillin-1a isoform X1

    Related
    ENSHSTP00010020999.1, ENSHSTT00010023141.1
    Conserved Domains (2) summary
    COG2268
    Location:4 → 414
    YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
    cd03399
    Location:30 → 175
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily

  3. XM_035150889.2 → XP_035006780.1  flotillin-1a isoform X3

    Conserved Domains (2) summary
    COG2268
    Location:5 → 344
    YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
    cd03399
    Location:5 → 105
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
Nucleotide Protein
Heading Accession and Version

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