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LOC118103266 beta-1,3-galactosyltransferase 1 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118103266, updated on 8-May-2024

Summary

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Gene symbol
LOC118103266
Gene description
beta-1,3-galactosyltransferase 1
Locus tag
HST_G00227440
See related
EnsemblRapid:ENSHSTG00010017661
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC118103266 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 24 NC_061506.1 (2695378..2744970, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 24 NC_048950.1 (2699280..2749855, complement)

Chromosome 24 - NC_061506.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118103286 Neighboring gene bile salt export pump Neighboring gene xin actin binding repeat containing 2a Neighboring gene cysteine/serine-rich nuclear protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061506.1 Reference HSTE1.2 Primary Assembly

    Range
    2695378..2744970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035150012.2 → XP_035005903.1  beta-1,3-galactosyltransferase 1

    Related
    ENSHSTP00010046609.1, ENSHSTT00010049459.1
    Conserved Domains (1) summary
    pfam01762
    Location:94 → 281
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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