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b4gat1 beta-1,4-glucuronyltransferase 1 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118102784, updated on 8-May-2024

Summary

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Gene symbol
b4gat1
Gene description
beta-1,4-glucuronyltransferase 1
Locus tag
HST_G00219420
See related
EnsemblRapid:ENSHSTG00010022727
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See b4gat1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
2
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 23 NC_061505.1 (930759..934834, complement)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 23 NC_048949.1 (718717..722853, complement)

Chromosome 23 - NC_061505.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118102771 Neighboring gene uncharacterized LOC124851329 Neighboring gene SIX homeobox 7 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene prefoldin subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-glucuronyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061505.1 Reference HSTE1.2 Primary Assembly

    Range
    930759..934834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035149277.2 → XP_035005168.1  beta-1,4-glucuronyltransferase 1

    Related
    ENSHSTP00010060181.1, ENSHSTT00010064114.1
    Conserved Domains (1) summary
    pfam13896
    Location:107 → 418
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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