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tlr2 toll-like receptor 2 [ Hippoglossus stenolepis (Pacific halibut) ]

Gene ID: 118102678, updated on 8-May-2024

Summary

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Gene symbol
tlr2
Gene description
toll-like receptor 2
Locus tag
HST_G00219490
See related
EnsemblRapid:ENSHSTG00010011123
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus stenolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
Orthologs
human zebrafish all
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Genomic context

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See tlr2 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
101 current HSTE1.2 (GCF_022539355.2) 23 NC_061505.1 (975348..980782)
100 previous assembly IPHC_HiSten_1.0 (GCF_013339905.1) 23 NC_048949.1 (763343..768808)

Chromosome 23 - NC_061505.1Genomic Context describing neighboring genes Neighboring gene chloride channel 3 Neighboring gene galactose-specific lectin nattectin Neighboring gene fibrinogen beta chain Neighboring gene ring finger protein 175 Neighboring gene uncharacterized LOC118102252 Neighboring gene small nucleolar RNA SNORD14 Neighboring gene small nucleolar RNA SNORD14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus stenolepis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSTE1.2 Primary Assembly

Genomic

  1. NC_061505.1 Reference HSTE1.2 Primary Assembly

    Range
    975348..980782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035149031.2 → XP_035004922.1  toll-like receptor 2

    Related
    ENSHSTP00010026977.1, ENSHSTT00010029251.1
    Conserved Domains (6) summary
    smart00255
    Location:656 → 811
    TIR; Toll - interleukin 1 - resistance
    PLN00113
    Location:465 → 541
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:59 → 80
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:60 → 384
    internalin_A; class 1 internalin InlA
    pfam13855
    Location:80 → 123
    LRR_8; Leucine rich repeat
    cd21340
    Location:342 → 492
    PPP1R42; protein phosphatase 1 regulatory subunit 42
Nucleotide Protein
Heading Accession and Version

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